Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 INGX-201ENST00000359239 846 ntBASIC16.82■□□□□ 0.28
REEP3Q6NUK4 AC009947.2-201ENST00000444014 672 ntBASIC16.82■□□□□ 0.28
REEP3Q6NUK4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AL645608.8-201ENST00000606034 2086 ntBASIC16.81■□□□□ 0.28
REEP3Q6NUK4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AC022898.2-201ENST00000616822 1312 ntBASIC16.81■□□□□ 0.28
REEP3Q6NUK4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AC092865.7-201ENST00000641832 219 ntBASIC16.81■□□□□ 0.28
REEP3Q6NUK4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.81■□□□□ 0.28
REEP3Q6NUK4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 CYP2D8P-201ENST00000433633 1490 ntBASIC16.8■□□□□ 0.28
REEP3Q6NUK4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms