Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 AC103564.2-201ENST00000432853 1299 ntBASIC21.53■■□□□ 1.04
PDS5AQ29RF7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 AC021087.4-201ENST00000563761 564 ntBASIC21.53■■□□□ 1.04
PDS5AQ29RF7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDS5AQ29RF7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDS5AQ29RF7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 AL022342.1-201ENST00000400363 863 ntBASIC21.52■■□□□ 1.03
PDS5AQ29RF7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDS5AQ29RF7 SIGLEC16-201ENST00000599858 1437 ntBASIC21.52■■□□□ 1.03
PDS5AQ29RF7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 AC079776.2-201ENST00000641154 1609 ntBASIC21.51■■□□□ 1.03
PDS5AQ29RF7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 HNRNPDP1-201ENST00000439535 754 ntBASIC21.51■■□□□ 1.03
PDS5AQ29RF7 DDX43P3-201ENST00000441064 443 ntBASIC21.51■■□□□ 1.03
PDS5AQ29RF7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 AC025062.2-201ENST00000605477 670 ntBASIC21.51■■□□□ 1.03
PDS5AQ29RF7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 FAM215A-202ENST00000632077 792 ntBASIC21.51■■□□□ 1.03
PDS5AQ29RF7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDS5AQ29RF7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms