Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDC42P60953 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC42P60953 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.52■□□□□ 0.23
CDC42P60953 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC42P60953 AC099343.3-201ENST00000605834 2503 ntBASIC16.52■□□□□ 0.23
CDC42P60953 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC42P60953 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC42P60953 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CDC42P60953 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC42P60953 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC42P60953 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 AL138688.1-201ENST00000624851 1594 ntBASIC16.51■□□□□ 0.23
CDC42P60953 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDC42P60953 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CDC42P60953 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC42P60953 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC42P60953 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDC42P60953 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.51■□□□□ 0.23
CDC42P60953 AC008622.2-201ENST00000617006 1229 ntBASIC16.51■□□□□ 0.23
CDC42P60953 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC42P60953 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDC42P60953 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC42P60953 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDC42P60953 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC42P60953 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC42P60953 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC42P60953 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 AC011676.5-201ENST00000624864 2660 ntBASIC16.5■□□□□ 0.23
CDC42P60953 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 RPS2P4-201ENST00000476944 856 ntBASIC16.5■□□□□ 0.23
CDC42P60953 AC090192.1-201ENST00000517740 490 ntBASIC16.5■□□□□ 0.23
CDC42P60953 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.5■□□□□ 0.23
CDC42P60953 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.5■□□□□ 0.23
CDC42P60953 AC142086.2-201ENST00000569753 217 ntBASIC16.5■□□□□ 0.23
CDC42P60953 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.5■□□□□ 0.23
CDC42P60953 AL031985.4-201ENST00000642138 673 ntBASIC16.5■□□□□ 0.23
CDC42P60953 KRT16P1-201ENST00000399124 1418 ntBASIC16.5■□□□□ 0.23
CDC42P60953 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC42P60953 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC42P60953 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDC42P60953 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.49■□□□□ 0.23
CDC42P60953 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.49■□□□□ 0.23
CDC42P60953 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CDC42P60953 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.49■□□□□ 0.23
CDC42P60953 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms