Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S2P59780 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.51■□□□□ 0.07
AP3S2P59780 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.51■□□□□ 0.07
AP3S2P59780 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S2P59780 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AP3S2P59780 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
AP3S2P59780 FLJ16779-201ENST00000612722 7638 ntBASIC15.5■□□□□ 0.07
AP3S2P59780 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AP3S2P59780 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S2P59780 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.5■□□□□ 0.07
AP3S2P59780 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP3S2P59780 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S2P59780 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S2P59780 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP3S2P59780 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S2P59780 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S2P59780 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
AP3S2P59780 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
AP3S2P59780 C1QL1P1-201ENST00000568105 661 ntBASIC15.49■□□□□ 0.07
AP3S2P59780 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 KRT8P11-201ENST00000409686 1436 ntBASIC15.49■□□□□ 0.07
AP3S2P59780 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S2P59780 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP3S2P59780 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S2P59780 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S2P59780 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3S2P59780 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
AP3S2P59780 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3S2P59780 PCDHB19P-201ENST00000570871 2371 ntBASIC15.48■□□□□ 0.07
AP3S2P59780 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
AP3S2P59780 AC093010.1-201ENST00000473625 1624 ntBASIC15.48■□□□□ 0.07
AP3S2P59780 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 BX276092.2-201ENST00000417668 665 ntBASIC15.48■□□□□ 0.07
AP3S2P59780 AC034268.1-201ENST00000441047 882 ntBASIC15.48■□□□□ 0.07
AP3S2P59780 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
AP3S2P59780 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.48■□□□□ 0.07
AP3S2P59780 AC133552.2-202ENST00000575694 574 ntBASIC15.48■□□□□ 0.07
AP3S2P59780 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
AP3S2P59780 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.48■□□□□ 0.07
AP3S2P59780 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
AP3S2P59780 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S2P59780 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms