Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN20P56880 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN20P56880 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN20P56880 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN20P56880 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLDN20P56880 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN20P56880 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN20P56880 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN20P56880 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN20P56880 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLDN20P56880 AC073592.3-201ENST00000625118 1834 ntBASIC16.53■□□□□ 0.24
CLDN20P56880 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CLDN20P56880 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN20P56880 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN20P56880 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLDN20P56880 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN20P56880 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.24
CLDN20P56880 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN20P56880 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN20P56880 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CLDN20P56880 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN20P56880 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN20P56880 MIR149-201ENST00000384879 89 ntBASIC16.52■□□□□ 0.24
CLDN20P56880 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN20P56880 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN20P56880 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN20P56880 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CLDN20P56880 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.52■□□□□ 0.24
CLDN20P56880 AC091076.1-201ENST00000610741 619 ntBASIC16.52■□□□□ 0.24
CLDN20P56880 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLDN20P56880 AP000550.4-202ENST00000639755 178 ntBASIC16.52■□□□□ 0.24
CLDN20P56880 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLDN20P56880 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN20P56880 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms