Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
FOXA3P55318 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
FOXA3P55318 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
FOXA3P55318 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
FOXA3P55318 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 TSPY26P-202ENST00000565928 3884 ntBASIC13.57□□□□□ -0.24
FOXA3P55318 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXA3P55318 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.56□□□□□ -0.24
FOXA3P55318 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.56□□□□□ -0.24
FOXA3P55318 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
FOXA3P55318 PRSS44-201ENST00000515154 1146 ntBASIC13.56□□□□□ -0.24
FOXA3P55318 AC087623.3-201ENST00000607047 1098 ntBASIC13.56□□□□□ -0.24
FOXA3P55318 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.56□□□□□ -0.24
FOXA3P55318 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
FOXA3P55318 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
FOXA3P55318 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXA3P55318 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.56□□□□□ -0.24
FOXA3P55318 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
FOXA3P55318 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXA3P55318 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
FOXA3P55318 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXA3P55318 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXA3P55318 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.55□□□□□ -0.24
FOXA3P55318 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
FOXA3P55318 C1QL1P1-201ENST00000568105 661 ntBASIC13.55□□□□□ -0.24
FOXA3P55318 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.55□□□□□ -0.24
FOXA3P55318 PCDHB19P-201ENST00000570871 2371 ntBASIC13.55□□□□□ -0.24
FOXA3P55318 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
FOXA3P55318 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXA3P55318 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXA3P55318 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXA3P55318 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXA3P55318 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXA3P55318 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXA3P55318 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms