Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AL096828.2-201ENST00000567259 1965 ntBASIC16.81■□□□□ 0.28
PSMD4P55036 AC112907.2-201ENST00000448639 330 ntBASIC16.81■□□□□ 0.28
PSMD4P55036 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.81■□□□□ 0.28
PSMD4P55036 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.81■□□□□ 0.28
PSMD4P55036 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.81■□□□□ 0.28
PSMD4P55036 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PSMD4P55036 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 AC099343.3-201ENST00000605834 2503 ntBASIC16.81■□□□□ 0.28
PSMD4P55036 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.8■□□□□ 0.28
PSMD4P55036 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PSMD4P55036 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 AC138028.4-201ENST00000564984 1845 ntBASIC16.8■□□□□ 0.28
PSMD4P55036 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.8■□□□□ 0.28
PSMD4P55036 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 KRT18P48-201ENST00000434763 852 ntBASIC16.8■□□□□ 0.28
PSMD4P55036 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.8■□□□□ 0.28
PSMD4P55036 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.8■□□□□ 0.28
PSMD4P55036 AC113404.2-201ENST00000507884 177 ntBASIC16.8■□□□□ 0.28
PSMD4P55036 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.8■□□□□ 0.28
PSMD4P55036 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.8■□□□□ 0.28
PSMD4P55036 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.8■□□□□ 0.28
PSMD4P55036 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 AC093010.1-201ENST00000473625 1624 ntBASIC16.8■□□□□ 0.28
PSMD4P55036 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.8■□□□□ 0.28
PSMD4P55036 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.8■□□□□ 0.28
PSMD4P55036 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PSMD4P55036 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
PSMD4P55036 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 LINC01126-201ENST00000623515 1646 ntBASIC16.79■□□□□ 0.28
PSMD4P55036 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
PSMD4P55036 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
PSMD4P55036 HLA-F-220ENST00000434407 884 ntBASIC16.79■□□□□ 0.28
PSMD4P55036 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PSMD4P55036 AL049597.2-201ENST00000565575 961 ntBASIC16.79■□□□□ 0.28
PSMD4P55036 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.79■□□□□ 0.28
PSMD4P55036 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.79■□□□□ 0.28
PSMD4P55036 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PSMD4P55036 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 REXO1L9P-201ENST00000604264 2108 ntBASIC16.79■□□□□ 0.28
PSMD4P55036 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PSMD4P55036 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PSMD4P55036 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PSMD4P55036 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.79■□□□□ 0.28
PSMD4P55036 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PSMD4P55036 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.78■□□□□ 0.28
PSMD4P55036 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.78■□□□□ 0.28
PSMD4P55036 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 AC007613.1-201ENST00000572811 2597 ntBASIC16.78■□□□□ 0.28
PSMD4P55036 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PSMD4P55036 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.78■□□□□ 0.28
PSMD4P55036 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms