Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 AC093677.2-201ENST00000600169 1863 ntBASIC19.09■□□□□ 0.65
CACNA2D1P54289 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA2D1P54289 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA2D1P54289 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CACNA2D1P54289 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CACNA2D1P54289 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.08■□□□□ 0.65
CACNA2D1P54289 AP000997.3-201ENST00000623333 2250 ntBASIC19.08■□□□□ 0.65
CACNA2D1P54289 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CACNA2D1P54289 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CACNA2D1P54289 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CACNA2D1P54289 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CACNA2D1P54289 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CACNA2D1P54289 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.08■□□□□ 0.65
CACNA2D1P54289 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 AL353801.3-201ENST00000609898 542 ntBASIC19.08■□□□□ 0.64
CACNA2D1P54289 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 AC018470.1-201ENST00000624790 3129 ntBASIC19.08■□□□□ 0.64
CACNA2D1P54289 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 NOC2LP1-202ENST00000452600 2235 ntBASIC19.08■□□□□ 0.64
CACNA2D1P54289 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.08■□□□□ 0.64
CACNA2D1P54289 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CACNA2D1P54289 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 IGHV3-47-201ENST00000425060 335 ntBASIC19.07■□□□□ 0.64
CACNA2D1P54289 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 AC074051.2-201ENST00000565115 352 ntBASIC19.07■□□□□ 0.64
CACNA2D1P54289 PRELID1P1-202ENST00000567272 903 ntBASIC19.07■□□□□ 0.64
CACNA2D1P54289 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 AC090164.3-201ENST00000610780 2143 ntBASIC19.07■□□□□ 0.64
CACNA2D1P54289 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CACNA2D1P54289 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CACNA2D1P54289 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 KRT17P6-201ENST00000453795 1220 ntBASIC19.06■□□□□ 0.64
CACNA2D1P54289 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 AC012615.1-201ENST00000565797 1299 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms