Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB28P51157 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.39■□□□□ 0.38
RAB28P51157 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RAB28P51157 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB28P51157 NEFHP1-201ENST00000412845 2629 ntBASIC17.39■□□□□ 0.37
RAB28P51157 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RAB28P51157 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RAB28P51157 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB28P51157 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RAB28P51157 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RAB28P51157 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 AL845331.1-201ENST00000424978 1190 ntBASIC17.39■□□□□ 0.37
RAB28P51157 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB28P51157 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB28P51157 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB28P51157 Z69720.1-201ENST00000601483 472 ntBASIC17.39■□□□□ 0.37
RAB28P51157 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.39■□□□□ 0.37
RAB28P51157 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 AC138028.4-201ENST00000564984 1845 ntBASIC17.39■□□□□ 0.37
RAB28P51157 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB28P51157 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB28P51157 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAB28P51157 AC233702.3-201ENST00000578656 1387 ntBASIC17.39■□□□□ 0.37
RAB28P51157 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB28P51157 AP000997.3-201ENST00000623333 2250 ntBASIC17.38■□□□□ 0.37
RAB28P51157 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB28P51157 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RAB28P51157 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.38■□□□□ 0.37
RAB28P51157 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.38■□□□□ 0.37
RAB28P51157 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB28P51157 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
RAB28P51157 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB28P51157 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB28P51157 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB28P51157 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB28P51157 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB28P51157 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB28P51157 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB28P51157 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB28P51157 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB28P51157 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB28P51157 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB28P51157 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB28P51157 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RAB28P51157 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB28P51157 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB28P51157 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms