Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARCN1P48444 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ARCN1P48444 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARCN1P48444 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARCN1P48444 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ARCN1P48444 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.08■□□□□ 0.48
ARCN1P48444 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARCN1P48444 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
ARCN1P48444 AC100803.2-201ENST00000562459 1963 ntBASIC18.08■□□□□ 0.48
ARCN1P48444 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARCN1P48444 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ARCN1P48444 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ARCN1P48444 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.07■□□□□ 0.48
ARCN1P48444 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
ARCN1P48444 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ARCN1P48444 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ARCN1P48444 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.07■□□□□ 0.48
ARCN1P48444 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.07■□□□□ 0.48
ARCN1P48444 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ARCN1P48444 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.07■□□□□ 0.48
ARCN1P48444 AC113404.2-201ENST00000507884 177 ntBASIC18.07■□□□□ 0.48
ARCN1P48444 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.07■□□□□ 0.48
ARCN1P48444 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
ARCN1P48444 AL031432.5-201ENST00000641059 760 ntBASIC18.07■□□□□ 0.48
ARCN1P48444 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.07■□□□□ 0.48
ARCN1P48444 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ARCN1P48444 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ARCN1P48444 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARCN1P48444 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ARCN1P48444 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.07■□□□□ 0.48
ARCN1P48444 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.07■□□□□ 0.48
ARCN1P48444 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.06■□□□□ 0.48
ARCN1P48444 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.06■□□□□ 0.48
ARCN1P48444 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ARCN1P48444 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ARCN1P48444 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
ARCN1P48444 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.06■□□□□ 0.48
ARCN1P48444 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.06■□□□□ 0.48
ARCN1P48444 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.06■□□□□ 0.48
ARCN1P48444 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.06■□□□□ 0.48
ARCN1P48444 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.06■□□□□ 0.48
ARCN1P48444 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ARCN1P48444 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
ARCN1P48444 LINC00602-201ENST00000629776 2065 ntBASIC18.06■□□□□ 0.48
ARCN1P48444 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.06■□□□□ 0.48
ARCN1P48444 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ARCN1P48444 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ARCN1P48444 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 AL391807.1-203ENST00000604392 2365 ntBASIC18.05■□□□□ 0.48
ARCN1P48444 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.05■□□□□ 0.48
ARCN1P48444 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.05■□□□□ 0.48
ARCN1P48444 LINC01238-205ENST00000567549 1107 ntBASIC18.05■□□□□ 0.48
ARCN1P48444 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.05■□□□□ 0.48
ARCN1P48444 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.05■□□□□ 0.48
ARCN1P48444 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.05■□□□□ 0.48
ARCN1P48444 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARCN1P48444 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms