Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 MIR149-201ENST00000384879 89 ntBASIC15.9■□□□□ 0.14
SOX2P48431 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SOX2P48431 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.9■□□□□ 0.14
SOX2P48431 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.89■□□□□ 0.13
SOX2P48431 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX2P48431 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 AC036111.1-201ENST00000533973 1582 ntBASIC15.89■□□□□ 0.13
SOX2P48431 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SOX2P48431 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.89■□□□□ 0.13
SOX2P48431 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX2P48431 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX2P48431 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.89■□□□□ 0.13
SOX2P48431 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SOX2P48431 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 AC096733.2-201ENST00000609937 1394 ntBASIC15.88■□□□□ 0.13
SOX2P48431 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 AC093010.1-201ENST00000473625 1624 ntBASIC15.88■□□□□ 0.13
SOX2P48431 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX2P48431 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.88■□□□□ 0.13
SOX2P48431 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SOX2P48431 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 KRT18P55-202ENST00000578578 1546 ntBASIC15.88■□□□□ 0.13
SOX2P48431 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SOX2P48431 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX2P48431 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SOX2P48431 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX2P48431 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms