Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM4SF4P48230 AC132938.6-201ENST00000623828 1655 ntBASIC20.45■□□□□ 0.86
TM4SF4P48230 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TM4SF4P48230 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TM4SF4P48230 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TM4SF4P48230 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.44■□□□□ 0.86
TM4SF4P48230 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.44■□□□□ 0.86
TM4SF4P48230 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TM4SF4P48230 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.44■□□□□ 0.86
TM4SF4P48230 DDX43P3-201ENST00000441064 443 ntBASIC20.44■□□□□ 0.86
TM4SF4P48230 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.44■□□□□ 0.86
TM4SF4P48230 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.44■□□□□ 0.86
TM4SF4P48230 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.44■□□□□ 0.86
TM4SF4P48230 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.44■□□□□ 0.86
TM4SF4P48230 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TM4SF4P48230 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TM4SF4P48230 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TM4SF4P48230 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.44■□□□□ 0.86
TM4SF4P48230 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM4SF4P48230 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.43■□□□□ 0.86
TM4SF4P48230 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 AL049757.1-201ENST00000616842 1596 ntBASIC20.43■□□□□ 0.86
TM4SF4P48230 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
TM4SF4P48230 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.43■□□□□ 0.86
TM4SF4P48230 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TM4SF4P48230 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 PMS2P4-201ENST00000412466 1052 ntBASIC20.43■□□□□ 0.86
TM4SF4P48230 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.43■□□□□ 0.86
TM4SF4P48230 SIGLEC30P-201ENST00000455569 941 ntBASIC20.43■□□□□ 0.86
TM4SF4P48230 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
TM4SF4P48230 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TM4SF4P48230 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF4P48230 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.43■□□□□ 0.86
TM4SF4P48230 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TM4SF4P48230 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TM4SF4P48230 AL032819.2-201ENST00000624543 2162 ntBASIC20.42■□□□□ 0.86
TM4SF4P48230 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.42■□□□□ 0.86
TM4SF4P48230 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.42■□□□□ 0.86
TM4SF4P48230 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.42■□□□□ 0.86
TM4SF4P48230 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.42■□□□□ 0.86
TM4SF4P48230 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.42■□□□□ 0.86
TM4SF4P48230 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.42■□□□□ 0.86
TM4SF4P48230 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.42■□□□□ 0.86
TM4SF4P48230 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.42■□□□□ 0.86
TM4SF4P48230 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TM4SF4P48230 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TM4SF4P48230 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
TM4SF4P48230 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF4P48230 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF4P48230 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF4P48230 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 AP002414.1-201ENST00000391405 1147 ntBASIC20.41■□□□□ 0.86
TM4SF4P48230 PTCHD3P3-201ENST00000403073 906 ntBASIC20.41■□□□□ 0.86
TM4SF4P48230 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF4P48230 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 AC005225.4-201ENST00000557330 545 ntBASIC20.41■□□□□ 0.86
TM4SF4P48230 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF4P48230 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF4P48230 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF4P48230 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
TM4SF4P48230 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.41■□□□□ 0.86
TM4SF4P48230 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms