Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 AL096828.2-201ENST00000567259 1965 ntBASIC19.13■□□□□ 0.65
BRCC3P46736 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BRCC3P46736 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
BRCC3P46736 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.13■□□□□ 0.65
BRCC3P46736 FGFR3P6-201ENST00000457012 610 ntBASIC19.13■□□□□ 0.65
BRCC3P46736 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.13■□□□□ 0.65
BRCC3P46736 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.13■□□□□ 0.65
BRCC3P46736 AL355877.3-201ENST00000622820 899 ntBASIC19.13■□□□□ 0.65
BRCC3P46736 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 KRT8P47-201ENST00000604727 1398 ntBASIC19.13■□□□□ 0.65
BRCC3P46736 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
BRCC3P46736 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.13■□□□□ 0.65
BRCC3P46736 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BRCC3P46736 AC135776.1-201ENST00000319817 2481 ntBASIC19.13■□□□□ 0.65
BRCC3P46736 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCC3P46736 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCC3P46736 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCC3P46736 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.12■□□□□ 0.65
BRCC3P46736 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCC3P46736 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
BRCC3P46736 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCC3P46736 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
BRCC3P46736 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCC3P46736 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.12■□□□□ 0.65
BRCC3P46736 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCC3P46736 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BRCC3P46736 RNA5SP419-201ENST00000515908 135 ntBASIC19.12■□□□□ 0.65
BRCC3P46736 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.12■□□□□ 0.65
BRCC3P46736 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.12■□□□□ 0.65
BRCC3P46736 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BRCC3P46736 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.12■□□□□ 0.65
BRCC3P46736 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.12■□□□□ 0.65
BRCC3P46736 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCC3P46736 AC093677.2-201ENST00000600169 1863 ntBASIC19.11■□□□□ 0.65
BRCC3P46736 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
BRCC3P46736 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCC3P46736 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 AC007967.3-201ENST00000434308 558 ntBASIC19.11■□□□□ 0.65
BRCC3P46736 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCC3P46736 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.11■□□□□ 0.65
BRCC3P46736 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.11■□□□□ 0.65
BRCC3P46736 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
BRCC3P46736 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
BRCC3P46736 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCC3P46736 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms