Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
GDNFP39905 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.74■□□□□ 0.11
GDNFP39905 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
GDNFP39905 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.74■□□□□ 0.11
GDNFP39905 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
GDNFP39905 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDNFP39905 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GDNFP39905 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GDNFP39905 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
GDNFP39905 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.73■□□□□ 0.11
GDNFP39905 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
GDNFP39905 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GDNFP39905 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
GDNFP39905 AL353807.1-201ENST00000427475 662 ntBASIC15.73■□□□□ 0.11
GDNFP39905 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.73■□□□□ 0.11
GDNFP39905 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.73■□□□□ 0.11
GDNFP39905 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 AC131212.4-201ENST00000623606 975 ntBASIC15.73■□□□□ 0.11
GDNFP39905 KRT16P1-201ENST00000399124 1418 ntBASIC15.73■□□□□ 0.11
GDNFP39905 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
GDNFP39905 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.73■□□□□ 0.11
GDNFP39905 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GDNFP39905 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.73■□□□□ 0.11
GDNFP39905 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDNFP39905 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.72■□□□□ 0.11
GDNFP39905 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GDNFP39905 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GDNFP39905 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 AC008040.2-201ENST00000461049 708 ntBASIC15.72■□□□□ 0.11
GDNFP39905 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.72■□□□□ 0.11
GDNFP39905 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.72■□□□□ 0.11
GDNFP39905 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 Z99916.2-201ENST00000604037 246 ntBASIC15.72■□□□□ 0.11
GDNFP39905 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GDNFP39905 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.72■□□□□ 0.11
GDNFP39905 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
GDNFP39905 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 CROCCP1-201ENST00000426910 5675 ntBASIC15.72■□□□□ 0.11
GDNFP39905 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDNFP39905 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
GDNFP39905 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
GDNFP39905 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.71■□□□□ 0.11
GDNFP39905 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 RPS2P55-201ENST00000397318 883 ntBASIC15.71■□□□□ 0.11
GDNFP39905 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 AC091390.4-202ENST00000476426 537 ntBASIC15.71■□□□□ 0.11
GDNFP39905 AC107956.1-201ENST00000494359 873 ntBASIC15.71■□□□□ 0.11
GDNFP39905 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.71■□□□□ 0.11
GDNFP39905 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GDNFP39905 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.71■□□□□ 0.11
GDNFP39905 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.71■□□□□ 0.11
GDNFP39905 AC113410.3-201ENST00000623366 203 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms