Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.87□□□□□ -0.03
SNCAP37840 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SNCAP37840 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 NIFKP9-201ENST00000419265 221 ntBASIC14.87□□□□□ -0.03
SNCAP37840 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SNCAP37840 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.87□□□□□ -0.03
SNCAP37840 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.87□□□□□ -0.03
SNCAP37840 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.87□□□□□ -0.03
SNCAP37840 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.87□□□□□ -0.03
SNCAP37840 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
SNCAP37840 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SNCAP37840 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SNCAP37840 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCAP37840 MTMR9LP-203ENST00000426597 1545 ntBASIC14.87□□□□□ -0.03
SNCAP37840 AC093677.2-201ENST00000600169 1863 ntBASIC14.86□□□□□ -0.03
SNCAP37840 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.86□□□□□ -0.03
SNCAP37840 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 AL121761.2-201ENST00000598007 1648 ntBASIC14.86□□□□□ -0.03
SNCAP37840 AP001094.4-201ENST00000579008 2176 ntBASIC14.86□□□□□ -0.03
SNCAP37840 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 ESRRAP1-201ENST00000400596 1257 ntBASIC14.86□□□□□ -0.03
SNCAP37840 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 KSR1P1-201ENST00000446298 240 ntBASIC14.86□□□□□ -0.03
SNCAP37840 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.86□□□□□ -0.03
SNCAP37840 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.86□□□□□ -0.03
SNCAP37840 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.86□□□□□ -0.03
SNCAP37840 AC124016.1-201ENST00000609552 612 ntBASIC14.86□□□□□ -0.03
SNCAP37840 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNCAP37840 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SNCAP37840 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.86□□□□□ -0.03
SNCAP37840 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.86□□□□□ -0.03
SNCAP37840 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCAP37840 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.85□□□□□ -0.03
SNCAP37840 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.85□□□□□ -0.03
SNCAP37840 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.85□□□□□ -0.03
SNCAP37840 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.85□□□□□ -0.03
SNCAP37840 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
SNCAP37840 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms