Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDE6BP35913 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.13■■□□□ 1.13
PDE6BP35913 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
PDE6BP35913 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.13■■□□□ 1.13
PDE6BP35913 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PDE6BP35913 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PDE6BP35913 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.13■■□□□ 1.13
PDE6BP35913 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PDE6BP35913 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PDE6BP35913 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PDE6BP35913 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDE6BP35913 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDE6BP35913 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDE6BP35913 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
PDE6BP35913 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PDE6BP35913 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PDE6BP35913 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.12■■□□□ 1.13
PDE6BP35913 AC132938.6-201ENST00000623828 1655 ntBASIC22.12■■□□□ 1.13
PDE6BP35913 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.12■■□□□ 1.13
PDE6BP35913 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.12■■□□□ 1.13
PDE6BP35913 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 AL645939.2-201ENST00000427340 991 ntBASIC22.12■■□□□ 1.13
PDE6BP35913 CNN2P11-201ENST00000429351 262 ntBASIC22.12■■□□□ 1.13
PDE6BP35913 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.12■■□□□ 1.13
PDE6BP35913 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PDE6BP35913 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PDE6BP35913 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PDE6BP35913 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.12■■□□□ 1.13
PDE6BP35913 AC073592.5-201ENST00000624854 528 ntBASIC22.12■■□□□ 1.13
PDE6BP35913 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PDE6BP35913 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDE6BP35913 KRT8P47-201ENST00000604727 1398 ntBASIC22.12■■□□□ 1.13
PDE6BP35913 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.11■■□□□ 1.13
PDE6BP35913 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.11■■□□□ 1.13
PDE6BP35913 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.11■■□□□ 1.13
PDE6BP35913 HTR5BP-201ENST00000430851 1154 ntBASIC22.11■■□□□ 1.13
PDE6BP35913 MKNK2P1-201ENST00000437526 628 ntBASIC22.11■■□□□ 1.13
PDE6BP35913 VN2R19P-201ENST00000442399 1052 ntBASIC22.11■■□□□ 1.13
PDE6BP35913 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
PDE6BP35913 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.11■■□□□ 1.13
PDE6BP35913 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.11■■□□□ 1.13
PDE6BP35913 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.11■■□□□ 1.13
PDE6BP35913 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.11■■□□□ 1.13
PDE6BP35913 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
PDE6BP35913 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PDE6BP35913 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.11■■□□□ 1.13
PDE6BP35913 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.11■■□□□ 1.13
PDE6BP35913 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.11■■□□□ 1.13
PDE6BP35913 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PDE6BP35913 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.1■■□□□ 1.13
PDE6BP35913 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.1■■□□□ 1.13
PDE6BP35913 AL020989.1-201ENST00000422979 469 ntBASIC22.1■■□□□ 1.13
PDE6BP35913 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.1■■□□□ 1.13
PDE6BP35913 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE6BP35913 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE6BP35913 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PDE6BP35913 GMCL1P1-201ENST00000463439 1581 ntBASIC22.09■■□□□ 1.13
PDE6BP35913 AC006504.4-201ENST00000592118 1568 ntBASIC22.09■■□□□ 1.13
PDE6BP35913 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.09■■□□□ 1.13
PDE6BP35913 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.09■■□□□ 1.13
PDE6BP35913 AC108073.2-201ENST00000464002 357 ntBASIC22.09■■□□□ 1.13
PDE6BP35913 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.09■■□□□ 1.13
PDE6BP35913 AP002472.1-201ENST00000577490 586 ntBASIC22.09■■□□□ 1.13
PDE6BP35913 MIR4751-201ENST00000578027 74 ntBASIC22.09■■□□□ 1.13
PDE6BP35913 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE6BP35913 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE6BP35913 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms