Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
RFC1P35251 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RFC1P35251 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RFC1P35251 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC1P35251 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC1P35251 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RFC1P35251 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC1P35251 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC1P35251 HOMER2P1-201ENST00000455653 964 ntBASIC19.02■□□□□ 0.64
RFC1P35251 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC1P35251 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC1P35251 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.02■□□□□ 0.64
RFC1P35251 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.02■□□□□ 0.64
RFC1P35251 AC024563.2-201ENST00000603282 481 ntBASIC19.02■□□□□ 0.64
RFC1P35251 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC1P35251 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC1P35251 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC1P35251 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC1P35251 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC1P35251 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFC1P35251 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC1P35251 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
RFC1P35251 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC1P35251 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
RFC1P35251 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.02■□□□□ 0.63
RFC1P35251 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC1P35251 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 LINC00167-201ENST00000530583 1419 ntBASIC19.01■□□□□ 0.63
RFC1P35251 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.01■□□□□ 0.63
RFC1P35251 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC1P35251 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RFC1P35251 AL359075.1-203ENST00000462729 1002 ntBASIC19.01■□□□□ 0.63
RFC1P35251 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC1P35251 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.01■□□□□ 0.63
RFC1P35251 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RFC1P35251 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC1P35251 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC1P35251 LINC00602-201ENST00000629776 2065 ntBASIC19.01■□□□□ 0.63
RFC1P35251 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFC1P35251 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19■□□□□ 0.63
RFC1P35251 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RFC1P35251 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 HES2-202ENST00000377836 507 ntTSL 2 BASIC19■□□□□ 0.63
RFC1P35251 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19■□□□□ 0.63
RFC1P35251 SLC25A6P5-201ENST00000435663 894 ntBASIC19■□□□□ 0.63
RFC1P35251 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19■□□□□ 0.63
RFC1P35251 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19■□□□□ 0.63
RFC1P35251 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19■□□□□ 0.63
RFC1P35251 AC008687.5-201ENST00000593746 558 ntBASIC19■□□□□ 0.63
RFC1P35251 HYMAI.1-201ENST00000620949 238 ntBASIC19■□□□□ 0.63
RFC1P35251 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFC1P35251 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFC1P35251 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 PKD1P1-201ENST00000458669 6805 ntBASIC19■□□□□ 0.63
RFC1P35251 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFC1P35251 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RFC1P35251 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19■□□□□ 0.63
RFC1P35251 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RFC1P35251 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
RFC1P35251 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms