Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.53■□□□□ 0.08
CD40P25942 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CD40P25942 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.53■□□□□ 0.08
CD40P25942 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.53■□□□□ 0.08
CD40P25942 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD40P25942 TP73-AS1-210ENST00000637775 1455 ntBASIC15.52■□□□□ 0.08
CD40P25942 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD40P25942 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CD40P25942 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CD40P25942 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD40P25942 AC087289.5-201ENST00000586076 3175 ntBASIC15.52■□□□□ 0.08
CD40P25942 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CD40P25942 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CD40P25942 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD40P25942 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD40P25942 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.52■□□□□ 0.08
CD40P25942 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD40P25942 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.52■□□□□ 0.08
CD40P25942 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.52■□□□□ 0.08
CD40P25942 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.52■□□□□ 0.08
CD40P25942 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD40P25942 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.52■□□□□ 0.07
CD40P25942 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CD40P25942 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD40P25942 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 AC125634.1-201ENST00000438758 1403 ntBASIC15.51■□□□□ 0.07
CD40P25942 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CD40P25942 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.51■□□□□ 0.07
CD40P25942 RCN1P2-201ENST00000398357 915 ntBASIC15.51■□□□□ 0.07
CD40P25942 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CD40P25942 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.51■□□□□ 0.07
CD40P25942 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.51■□□□□ 0.07
CD40P25942 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 AL138781.2-201ENST00000617896 1843 ntBASIC15.51■□□□□ 0.07
CD40P25942 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.51■□□□□ 0.07
CD40P25942 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.51■□□□□ 0.07
CD40P25942 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD40P25942 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.5■□□□□ 0.07
CD40P25942 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.5■□□□□ 0.07
CD40P25942 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD40P25942 SAPCD2P3-201ENST00000455031 850 ntBASIC15.5■□□□□ 0.07
CD40P25942 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.5■□□□□ 0.07
CD40P25942 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.5■□□□□ 0.07
CD40P25942 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.5■□□□□ 0.07
CD40P25942 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CD40P25942 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD40P25942 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms