Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NR4A1P22736 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 TSPY7P-201ENST00000431358 1114 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 SLC25A6P5-201ENST00000435663 894 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.79■□□□□ 0.28
NR4A1P22736 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 MIR4785-201ENST00000585005 73 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.79■□□□□ 0.28
NR4A1P22736 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.79■□□□□ 0.28
NR4A1P22736 AL445675.2-201ENST00000620291 557 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 CR392000.1-201ENST00000624770 1228 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.79■□□□□ 0.28
NR4A1P22736 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 AL162727.3-201ENST00000635661 2787 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NR4A1P22736 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 KRT16P1-201ENST00000399124 1418 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.78■□□□□ 0.28
NR4A1P22736 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
NR4A1P22736 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NR4A1P22736 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NR4A1P22736 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NR4A1P22736 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NR4A1P22736 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.78■□□□□ 0.28
NR4A1P22736 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.78■□□□□ 0.28
NR4A1P22736 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.78■□□□□ 0.28
NR4A1P22736 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.78■□□□□ 0.28
NR4A1P22736 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NR4A1P22736 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NR4A1P22736 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NR4A1P22736 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
NR4A1P22736 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.78■□□□□ 0.28
NR4A1P22736 AL356309.3-201ENST00000624132 1934 ntBASIC16.78■□□□□ 0.28
NR4A1P22736 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NR4A1P22736 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.78■□□□□ 0.28
NR4A1P22736 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR4A1P22736 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NR4A1P22736 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NR4A1P22736 AC008741.2-201ENST00000612792 3115 ntBASIC16.77■□□□□ 0.28
NR4A1P22736 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.77■□□□□ 0.28
NR4A1P22736 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NR4A1P22736 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NR4A1P22736 AL355355.2-201ENST00000442321 338 ntBASIC16.77■□□□□ 0.28
NR4A1P22736 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.77■□□□□ 0.28
NR4A1P22736 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.77■□□□□ 0.28
NR4A1P22736 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.77■□□□□ 0.28
NR4A1P22736 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NR4A1P22736 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.77■□□□□ 0.28
NR4A1P22736 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.77■□□□□ 0.28
NR4A1P22736 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
NR4A1P22736 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
NR4A1P22736 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.77■□□□□ 0.28
NR4A1P22736 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms