Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDH3P22223 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CDH3P22223 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 KRT18P48-201ENST00000434763 852 ntBASIC17.68■□□□□ 0.42
CDH3P22223 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 BX276092.5-203ENST00000456199 560 ntBASIC17.68■□□□□ 0.42
CDH3P22223 AP003733.1-201ENST00000491725 852 ntBASIC17.68■□□□□ 0.42
CDH3P22223 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.68■□□□□ 0.42
CDH3P22223 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH3P22223 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 AL121672.3-201ENST00000608644 468 ntBASIC17.68■□□□□ 0.42
CDH3P22223 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDH3P22223 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
CDH3P22223 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH3P22223 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CDH3P22223 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH3P22223 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH3P22223 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 AC093525.10-201ENST00000625130 1569 ntBASIC17.67■□□□□ 0.42
CDH3P22223 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 MIR149-201ENST00000384879 89 ntBASIC17.67■□□□□ 0.42
CDH3P22223 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
CDH3P22223 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.67■□□□□ 0.42
CDH3P22223 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH3P22223 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 AC024563.2-201ENST00000603282 481 ntBASIC17.67■□□□□ 0.42
CDH3P22223 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH3P22223 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH3P22223 AC009102.3-201ENST00000623118 1491 ntBASIC17.67■□□□□ 0.42
CDH3P22223 AL499627.1-201ENST00000569373 2188 ntBASIC17.67■□□□□ 0.42
CDH3P22223 AC099343.3-201ENST00000605834 2503 ntBASIC17.67■□□□□ 0.42
CDH3P22223 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH3P22223 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH3P22223 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH3P22223 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH3P22223 ANO7L1-203ENST00000602586 1720 ntBASIC17.67■□□□□ 0.42
CDH3P22223 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDH3P22223 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH3P22223 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH3P22223 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH3P22223 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH3P22223 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH3P22223 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH3P22223 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH3P22223 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDH3P22223 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CDH3P22223 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH3P22223 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms