Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 UNC93B3-201ENST00000308076 687 ntBASIC14.03□□□□□ -0.16
RAB5AP20339 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.03□□□□□ -0.16
RAB5AP20339 AC099791.1-201ENST00000416440 715 ntBASIC14.03□□□□□ -0.16
RAB5AP20339 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB5AP20339 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB5AP20339 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RAB5AP20339 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RAB5AP20339 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB5AP20339 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB5AP20339 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 AC126755.1-201ENST00000525846 6405 ntBASIC14.02□□□□□ -0.16
RAB5AP20339 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB5AP20339 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB5AP20339 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB5AP20339 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB5AP20339 AC091799.1-201ENST00000422823 811 ntBASIC14.02□□□□□ -0.17
RAB5AP20339 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB5AP20339 CDV3P1-201ENST00000471403 739 ntBASIC14.02□□□□□ -0.17
RAB5AP20339 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 AC027682.1-201ENST00000562846 899 ntBASIC14.02□□□□□ -0.17
RAB5AP20339 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RAB5AP20339 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5AP20339 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
RAB5AP20339 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5AP20339 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAB5AP20339 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAB5AP20339 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5AP20339 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 HEIH-201ENST00000623091 1652 ntBASIC14.01□□□□□ -0.17
RAB5AP20339 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5AP20339 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5AP20339 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5AP20339 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB5AP20339 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5AP20339 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 AC097381.1-201ENST00000429019 1296 ntBASIC14.01□□□□□ -0.17
RAB5AP20339 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5AP20339 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms