Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.73■□□□□ 0.27
PRKCAP17252 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 AC009065.1-201ENST00000564055 1225 ntBASIC16.73■□□□□ 0.27
PRKCAP17252 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.73■□□□□ 0.27
PRKCAP17252 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.73■□□□□ 0.27
PRKCAP17252 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRKCAP17252 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRKCAP17252 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRKCAP17252 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.72■□□□□ 0.27
PRKCAP17252 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.72■□□□□ 0.27
PRKCAP17252 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.72■□□□□ 0.27
PRKCAP17252 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PRKCAP17252 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRKCAP17252 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PRKCAP17252 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.72■□□□□ 0.27
PRKCAP17252 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 MIR149-201ENST00000384879 89 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 YBX1P2-201ENST00000489612 999 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
PRKCAP17252 AL441883.1-201ENST00000566170 1045 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 RN7SL850P-201ENST00000579959 291 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 MIR3917-201ENST00000580971 93 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 AC006011.2-201ENST00000621313 1158 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 AC011558.1-201ENST00000623459 338 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRKCAP17252 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 AC009102.3-201ENST00000623118 1491 ntBASIC16.72■□□□□ 0.27
PRKCAP17252 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.72■□□□□ 0.27
PRKCAP17252 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRKCAP17252 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRKCAP17252 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 PKD1P1-201ENST00000458669 6805 ntBASIC16.71■□□□□ 0.27
PRKCAP17252 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PRKCAP17252 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PRKCAP17252 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.71■□□□□ 0.27
PRKCAP17252 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRKCAP17252 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.71■□□□□ 0.27
PRKCAP17252 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PRKCAP17252 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRKCAP17252 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRKCAP17252 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PRKCAP17252 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.7■□□□□ 0.26
PRKCAP17252 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms