Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CFTRP13569 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CFTRP13569 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC30.68■■■□□ 2.5
CFTRP13569 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC30.68■■■□□ 2.5
CFTRP13569 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CFTRP13569 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CFTRP13569 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC30.67■■■□□ 2.5
CFTRP13569 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFTRP13569 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CFTRP13569 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC30.67■■■□□ 2.5
CFTRP13569 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CFTRP13569 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC30.67■■■□□ 2.5
CFTRP13569 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC30.67■■■□□ 2.5
CFTRP13569 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC30.67■■■□□ 2.5
CFTRP13569 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC30.67■■■□□ 2.5
CFTRP13569 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC30.67■■■□□ 2.5
CFTRP13569 BCAR1-209ENST00000546196 1340 ntBASIC30.67■■■□□ 2.5
CFTRP13569 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFTRP13569 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC30.66■■■□□ 2.5
CFTRP13569 AC093010.1-201ENST00000473625 1624 ntBASIC30.66■■■□□ 2.5
CFTRP13569 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
CFTRP13569 KLK8-202ENST00000320838 456 ntTSL 5 BASIC30.66■■■□□ 2.5
CFTRP13569 PNKD-204ENST00000436005 978 ntTSL 5 BASIC30.66■■■□□ 2.5
CFTRP13569 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC30.66■■■□□ 2.5
CFTRP13569 AC109322.1-201ENST00000524499 1264 ntBASIC30.66■■■□□ 2.5
CFTRP13569 AC022145.2-201ENST00000598203 171 ntBASIC30.66■■■□□ 2.5
CFTRP13569 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC30.66■■■□□ 2.5
CFTRP13569 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CFTRP13569 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CFTRP13569 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CFTRP13569 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CFTRP13569 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CFTRP13569 USP48-205ENST00000421625 2818 ntTSL 2 BASIC30.65■■■□□ 2.5
CFTRP13569 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC30.65■■■□□ 2.5
CFTRP13569 SMN2-210ENST00000511812 867 ntTSL 2 BASIC30.65■■■□□ 2.5
CFTRP13569 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC30.65■■■□□ 2.5
CFTRP13569 AC015911.4-201ENST00000588022 1070 ntBASIC30.65■■■□□ 2.5
CFTRP13569 AC105339.1-204ENST00000636249 355 ntBASIC30.65■■■□□ 2.5
CFTRP13569 FUT8-AS1-201ENST00000621019 1521 ntBASIC30.65■■■□□ 2.5
CFTRP13569 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC30.65■■■□□ 2.5
CFTRP13569 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFTRP13569 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CFTRP13569 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC30.65■■■□□ 2.5
CFTRP13569 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CFTRP13569 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CFTRP13569 AC003669.1-201ENST00000334569 611 ntBASIC30.64■■■□□ 2.5
CFTRP13569 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CFTRP13569 CCDC74BP1-201ENST00000508880 1123 ntBASIC30.64■■■□□ 2.5
CFTRP13569 AL390955.2-201ENST00000603032 514 ntBASIC30.64■■■□□ 2.5
CFTRP13569 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
CFTRP13569 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CFTRP13569 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CFTRP13569 SIRPAP1-201ENST00000448467 1770 ntBASIC30.64■■■□□ 2.49
CFTRP13569 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CFTRP13569 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
CFTRP13569 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CFTRP13569 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC30.63■■■□□ 2.49
CFTRP13569 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CFTRP13569 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CFTRP13569 AP002414.1-201ENST00000391405 1147 ntBASIC30.63■■■□□ 2.49
CFTRP13569 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
CFTRP13569 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC30.63■■■□□ 2.49
CFTRP13569 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC30.63■■■□□ 2.49
CFTRP13569 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CFTRP13569 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CFTRP13569 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CFTRP13569 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC30.63■■■□□ 2.49
CFTRP13569 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC30.63■■■□□ 2.49
CFTRP13569 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CFTRP13569 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.63■■■□□ 2.49
CFTRP13569 AC005082.1-201ENST00000413042 2259 ntBASIC30.63■■■□□ 2.49
CFTRP13569 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CFTRP13569 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CFTRP13569 AC004835.2-201ENST00000603762 682 ntBASIC30.63■■■□□ 2.49
CFTRP13569 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC30.63■■■□□ 2.49
CFTRP13569 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CFTRP13569 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC30.62■■■□□ 2.49
CFTRP13569 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC30.62■■■□□ 2.49
CFTRP13569 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
CFTRP13569 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.62■■■□□ 2.49
CFTRP13569 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CFTRP13569 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC30.62■■■□□ 2.49
CFTRP13569 AC023141.5-201ENST00000458585 616 ntBASIC30.62■■■□□ 2.49
CFTRP13569 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CFTRP13569 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC30.61■■■□□ 2.49
CFTRP13569 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CFTRP13569 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC30.61■■■□□ 2.49
CFTRP13569 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CFTRP13569 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CFTRP13569 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CFTRP13569 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CFTRP13569 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CFTRP13569 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
CFTRP13569 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms