Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SCG2P13521 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCG2P13521 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 MTCL1P1-201ENST00000446207 792 ntBASIC20.74■□□□□ 0.91
SCG2P13521 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.74■□□□□ 0.91
SCG2P13521 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.74■□□□□ 0.91
SCG2P13521 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.74■□□□□ 0.91
SCG2P13521 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.74■□□□□ 0.91
SCG2P13521 IGHV3-41-201ENST00000613121 348 ntBASIC20.74■□□□□ 0.91
SCG2P13521 AC124864.1-201ENST00000623408 392 ntBASIC20.74■□□□□ 0.91
SCG2P13521 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SCG2P13521 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCG2P13521 AC100803.2-201ENST00000562459 1963 ntBASIC20.74■□□□□ 0.91
SCG2P13521 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG2P13521 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SCG2P13521 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.73■□□□□ 0.91
SCG2P13521 KRT18P55-202ENST00000578578 1546 ntBASIC20.73■□□□□ 0.91
SCG2P13521 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.73■□□□□ 0.91
SCG2P13521 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.73■□□□□ 0.91
SCG2P13521 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.73■□□□□ 0.91
SCG2P13521 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.73■□□□□ 0.91
SCG2P13521 AP002383.4-201ENST00000442518 975 ntBASIC20.73■□□□□ 0.91
SCG2P13521 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.73■□□□□ 0.91
SCG2P13521 AC112698.1-201ENST00000510299 916 ntBASIC20.73■□□□□ 0.91
SCG2P13521 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCG2P13521 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCG2P13521 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.73■□□□□ 0.91
SCG2P13521 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
SCG2P13521 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.73■□□□□ 0.91
SCG2P13521 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG2P13521 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG2P13521 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.72■□□□□ 0.91
SCG2P13521 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG2P13521 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG2P13521 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.72■□□□□ 0.91
SCG2P13521 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG2P13521 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SCG2P13521 KRT8P47-201ENST00000604727 1398 ntBASIC20.72■□□□□ 0.91
SCG2P13521 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
SCG2P13521 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG2P13521 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG2P13521 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 AL845331.1-201ENST00000424978 1190 ntBASIC20.71■□□□□ 0.91
SCG2P13521 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.71■□□□□ 0.91
SCG2P13521 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.71■□□□□ 0.91
SCG2P13521 NPAP1P7-201ENST00000613027 823 ntBASIC20.71■□□□□ 0.91
SCG2P13521 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG2P13521 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCG2P13521 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCG2P13521 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.71■□□□□ 0.91
SCG2P13521 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms