Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.84■□□□□ 0.13
UBCP0CG48 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.84■□□□□ 0.13
UBCP0CG48 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 BX088651.1-201ENST00000540551 451 ntBASIC15.84■□□□□ 0.13
UBCP0CG48 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.84■□□□□ 0.13
UBCP0CG48 AC104390.1-201ENST00000555663 520 ntBASIC15.84■□□□□ 0.13
UBCP0CG48 AP003071.4-201ENST00000562276 1284 ntBASIC15.84■□□□□ 0.13
UBCP0CG48 AC112497.1-201ENST00000624824 639 ntBASIC15.84■□□□□ 0.13
UBCP0CG48 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.84■□□□□ 0.13
UBCP0CG48 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
UBCP0CG48 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.84■□□□□ 0.13
UBCP0CG48 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.84■□□□□ 0.13
UBCP0CG48 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBCP0CG48 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBCP0CG48 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.83■□□□□ 0.13
UBCP0CG48 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBCP0CG48 LINC01126-201ENST00000623515 1646 ntBASIC15.83■□□□□ 0.13
UBCP0CG48 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBCP0CG48 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBCP0CG48 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.83■□□□□ 0.13
UBCP0CG48 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.83■□□□□ 0.13
UBCP0CG48 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.83■□□□□ 0.13
UBCP0CG48 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.83■□□□□ 0.12
UBCP0CG48 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.83■□□□□ 0.12
UBCP0CG48 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.83■□□□□ 0.12
UBCP0CG48 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.83■□□□□ 0.12
UBCP0CG48 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBCP0CG48 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBCP0CG48 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
UBCP0CG48 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.83■□□□□ 0.12
UBCP0CG48 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBCP0CG48 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.83■□□□□ 0.12
UBCP0CG48 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.82■□□□□ 0.12
UBCP0CG48 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.82■□□□□ 0.12
UBCP0CG48 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
UBCP0CG48 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 AC116562.4-202ENST00000641738 218 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 PCDHA12-202ENST00000613593 2588 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 AC084018.2-201ENST00000613093 2607 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.82■□□□□ 0.12
UBCP0CG48 AC092338.2-201ENST00000568827 1415 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 AL024508.2-201ENST00000607749 1894 ntBASIC15.82■□□□□ 0.12
UBCP0CG48 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms