Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HOXC6P09630 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXC6P09630 SIGLEC16-201ENST00000599858 1437 ntBASIC20.29■□□□□ 0.84
HOXC6P09630 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HOXC6P09630 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 AC073621.1-201ENST00000392730 636 ntBASIC20.29■□□□□ 0.84
HOXC6P09630 AC007967.2-201ENST00000432613 625 ntBASIC20.29■□□□□ 0.84
HOXC6P09630 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 AC006557.2-201ENST00000592985 1240 ntBASIC20.29■□□□□ 0.84
HOXC6P09630 AD001527.2-201ENST00000622994 785 ntBASIC20.29■□□□□ 0.84
HOXC6P09630 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
HOXC6P09630 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXC6P09630 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC6P09630 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HOXC6P09630 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC6P09630 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC6P09630 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HOXC6P09630 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.28■□□□□ 0.84
HOXC6P09630 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 BX005266.1-201ENST00000473402 457 ntBASIC20.28■□□□□ 0.84
HOXC6P09630 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HOXC6P09630 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC6P09630 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC6P09630 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC6P09630 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC6P09630 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HOXC6P09630 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
HOXC6P09630 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HOXC6P09630 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXC6P09630 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC6P09630 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC6P09630 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC6P09630 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXC6P09630 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HOXC6P09630 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.27■□□□□ 0.84
HOXC6P09630 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HOXC6P09630 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXC6P09630 AC027796.2-201ENST00000575326 344 ntBASIC20.27■□□□□ 0.84
HOXC6P09630 MTDHP5-201ENST00000598980 586 ntBASIC20.27■□□□□ 0.84
HOXC6P09630 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC6P09630 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC6P09630 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.27■□□□□ 0.83
HOXC6P09630 AC132938.6-201ENST00000623828 1655 ntBASIC20.26■□□□□ 0.83
HOXC6P09630 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
HOXC6P09630 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HOXC6P09630 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXC6P09630 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms