Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.61■□□□□ 0.25
THBS1P07996 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
THBS1P07996 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
THBS1P07996 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.61■□□□□ 0.25
THBS1P07996 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.61■□□□□ 0.25
THBS1P07996 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.61■□□□□ 0.25
THBS1P07996 ATP5G1P1-201ENST00000448724 379 ntBASIC16.61■□□□□ 0.25
THBS1P07996 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 RASA4DP-201ENST00000460726 1199 ntBASIC16.61■□□□□ 0.25
THBS1P07996 COX11P1-201ENST00000489116 835 ntBASIC16.61■□□□□ 0.25
THBS1P07996 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 AC024563.2-201ENST00000603282 481 ntBASIC16.61■□□□□ 0.25
THBS1P07996 AC140113.3-201ENST00000605663 199 ntBASIC16.61■□□□□ 0.25
THBS1P07996 AL023973.1-201ENST00000624619 620 ntBASIC16.61■□□□□ 0.25
THBS1P07996 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.61■□□□□ 0.25
THBS1P07996 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
THBS1P07996 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
THBS1P07996 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
THBS1P07996 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.6■□□□□ 0.25
THBS1P07996 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
THBS1P07996 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
THBS1P07996 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
THBS1P07996 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.6■□□□□ 0.25
THBS1P07996 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.6■□□□□ 0.25
THBS1P07996 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.6■□□□□ 0.25
THBS1P07996 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.6■□□□□ 0.25
THBS1P07996 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.6■□□□□ 0.25
THBS1P07996 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.6■□□□□ 0.25
THBS1P07996 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.6■□□□□ 0.25
THBS1P07996 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.6■□□□□ 0.25
THBS1P07996 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.6■□□□□ 0.25
THBS1P07996 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THBS1P07996 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
THBS1P07996 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
THBS1P07996 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.59■□□□□ 0.25
THBS1P07996 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 ARMC10P1-201ENST00000313754 855 ntBASIC16.59■□□□□ 0.25
THBS1P07996 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.59■□□□□ 0.25
THBS1P07996 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.59■□□□□ 0.25
THBS1P07996 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.59■□□□□ 0.25
THBS1P07996 AL137013.1-201ENST00000432946 1228 ntBASIC16.59■□□□□ 0.25
THBS1P07996 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.59■□□□□ 0.25
THBS1P07996 KRT18P57-201ENST00000443599 1254 ntBASIC16.59■□□□□ 0.25
THBS1P07996 AC104076.2-201ENST00000448912 469 ntBASIC16.59■□□□□ 0.25
THBS1P07996 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 AC010203.1-204ENST00000548782 407 ntBASIC16.59■□□□□ 0.25
THBS1P07996 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.59■□□□□ 0.25
THBS1P07996 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.59■□□□□ 0.25
THBS1P07996 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THBS1P07996 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms