Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 AL162727.3-201ENST00000635661 2787 ntBASIC15.17■□□□□ 0.02
CD74P04233 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.17■□□□□ 0.02
CD74P04233 PCDHB19P-201ENST00000570871 2371 ntBASIC15.17■□□□□ 0.02
CD74P04233 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.17■□□□□ 0.02
CD74P04233 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CD74P04233 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.17■□□□□ 0.02
CD74P04233 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 FAM207BP-201ENST00000447172 505 ntBASIC15.17■□□□□ 0.02
CD74P04233 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 AC130371.2-201ENST00000619443 611 ntBASIC15.17■□□□□ 0.02
CD74P04233 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
CD74P04233 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.17■□□□□ 0.02
CD74P04233 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CD74P04233 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.17■□□□□ 0.02
CD74P04233 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 AC100803.2-201ENST00000562459 1963 ntBASIC15.16■□□□□ 0.02
CD74P04233 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 KSR1P1-201ENST00000446298 240 ntBASIC15.16■□□□□ 0.02
CD74P04233 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.16■□□□□ 0.02
CD74P04233 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.16■□□□□ 0.02
CD74P04233 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 AL137784.2-201ENST00000607332 1000 ntBASIC15.16■□□□□ 0.02
CD74P04233 AC069544.1-201ENST00000609399 999 ntBASIC15.16■□□□□ 0.02
CD74P04233 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD74P04233 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CD74P04233 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD74P04233 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CD74P04233 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CD74P04233 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.15■□□□□ 0.02
CD74P04233 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD74P04233 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.15■□□□□ 0.02
CD74P04233 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.15■□□□□ 0.02
CD74P04233 KRASP1-201ENST00000407852 552 ntBASIC15.15■□□□□ 0.02
CD74P04233 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.15■□□□□ 0.02
CD74P04233 RPS2P4-201ENST00000476944 856 ntBASIC15.15■□□□□ 0.02
CD74P04233 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CD74P04233 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD74P04233 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.15■□□□□ 0.02
CD74P04233 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.15■□□□□ 0.02
CD74P04233 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD74P04233 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CD74P04233 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 HOXB1-202ENST00000577092 1414 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms