Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.8■□□□□ 0.12
LCATP04180 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.8■□□□□ 0.12
LCATP04180 AC211429.1-201ENST00000415277 523 ntBASIC15.8■□□□□ 0.12
LCATP04180 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.8■□□□□ 0.12
LCATP04180 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.8■□□□□ 0.12
LCATP04180 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.8■□□□□ 0.12
LCATP04180 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.8■□□□□ 0.12
LCATP04180 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LCATP04180 AC012306.2-201ENST00000609350 630 ntBASIC15.8■□□□□ 0.12
LCATP04180 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LCATP04180 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.8■□□□□ 0.12
LCATP04180 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LCATP04180 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LCATP04180 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
LCATP04180 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LCATP04180 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCATP04180 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.79■□□□□ 0.12
LCATP04180 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 BX664615.1-201ENST00000443558 458 ntBASIC15.79■□□□□ 0.12
LCATP04180 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.79■□□□□ 0.12
LCATP04180 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.79■□□□□ 0.12
LCATP04180 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.79■□□□□ 0.12
LCATP04180 AC008687.5-201ENST00000593746 558 ntBASIC15.79■□□□□ 0.12
LCATP04180 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LCATP04180 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LCATP04180 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.79■□□□□ 0.12
LCATP04180 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 AC068880.1-201ENST00000507289 2297 ntBASIC15.79■□□□□ 0.12
LCATP04180 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LCATP04180 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCATP04180 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LCATP04180 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.78■□□□□ 0.12
LCATP04180 TERF1P1-201ENST00000311003 1181 ntBASIC15.78■□□□□ 0.12
LCATP04180 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 PVRIG2P-201ENST00000435460 978 ntBASIC15.78■□□□□ 0.12
LCATP04180 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.78■□□□□ 0.12
LCATP04180 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LCATP04180 LINC01023-201ENST00000606054 436 ntBASIC15.78■□□□□ 0.12
LCATP04180 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LCATP04180 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCATP04180 AC093010.1-201ENST00000473625 1624 ntBASIC15.78■□□□□ 0.12
LCATP04180 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCATP04180 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms