Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP3BO95985 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP3BO95985 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.49■□□□□ 0.55
TOP3BO95985 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOP3BO95985 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.49■□□□□ 0.55
TOP3BO95985 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
TOP3BO95985 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.49■□□□□ 0.55
TOP3BO95985 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOP3BO95985 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TOP3BO95985 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.49■□□□□ 0.55
TOP3BO95985 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.49■□□□□ 0.55
TOP3BO95985 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TOP3BO95985 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TOP3BO95985 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.49■□□□□ 0.55
TOP3BO95985 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TOP3BO95985 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.48■□□□□ 0.55
TOP3BO95985 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.48■□□□□ 0.55
TOP3BO95985 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP3BO95985 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.48■□□□□ 0.55
TOP3BO95985 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 BX276092.5-203ENST00000456199 560 ntBASIC18.48■□□□□ 0.55
TOP3BO95985 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
TOP3BO95985 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP3BO95985 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.48■□□□□ 0.55
TOP3BO95985 SLC25A6P4-201ENST00000586535 553 ntBASIC18.48■□□□□ 0.55
TOP3BO95985 AP002414.4-201ENST00000589764 1148 ntBASIC18.48■□□□□ 0.55
TOP3BO95985 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
TOP3BO95985 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TOP3BO95985 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TOP3BO95985 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TOP3BO95985 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOP3BO95985 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
TOP3BO95985 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.48■□□□□ 0.55
TOP3BO95985 REXO1L9P-201ENST00000604264 2108 ntBASIC18.47■□□□□ 0.55
TOP3BO95985 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
TOP3BO95985 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
TOP3BO95985 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TOP3BO95985 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TOP3BO95985 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TOP3BO95985 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
TOP3BO95985 NUS1P1-201ENST00000446295 882 ntBASIC18.47■□□□□ 0.55
TOP3BO95985 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.47■□□□□ 0.55
TOP3BO95985 AC011498.5-201ENST00000592027 486 ntBASIC18.47■□□□□ 0.55
TOP3BO95985 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
TOP3BO95985 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 AC134043.2-201ENST00000624206 2238 ntBASIC18.47■□□□□ 0.55
TOP3BO95985 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.47■□□□□ 0.55
TOP3BO95985 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.47■□□□□ 0.55
TOP3BO95985 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP3BO95985 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP3BO95985 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TOP3BO95985 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TOP3BO95985 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP3BO95985 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TOP3BO95985 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 AC008556.1-201ENST00000610908 2040 ntBASIC18.46■□□□□ 0.55
TOP3BO95985 MRPL3P1-201ENST00000400109 1033 ntBASIC18.46■□□□□ 0.55
TOP3BO95985 TSPY19P-201ENST00000418461 509 ntBASIC18.46■□□□□ 0.55
TOP3BO95985 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 TSPY18P-201ENST00000441642 509 ntBASIC18.46■□□□□ 0.55
TOP3BO95985 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP3BO95985 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.46■□□□□ 0.55
TOP3BO95985 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.46■□□□□ 0.55
TOP3BO95985 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.46■□□□□ 0.55
TOP3BO95985 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP3BO95985 AC012313.1-201ENST00000593393 3059 ntBASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms