Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.12■□□□□ 0.01
SIX6O95475 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.12■□□□□ 0.01
SIX6O95475 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SIX6O95475 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.12■□□□□ 0.01
SIX6O95475 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.12■□□□□ 0.01
SIX6O95475 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.12■□□□□ 0.01
SIX6O95475 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SIX6O95475 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.12■□□□□ 0.01
SIX6O95475 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.12■□□□□ 0.01
SIX6O95475 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIX6O95475 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 LINC01126-201ENST00000623515 1646 ntBASIC15.11■□□□□ 0.01
SIX6O95475 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.11■□□□□ 0.01
SIX6O95475 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.11■□□□□ 0.01
SIX6O95475 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
SIX6O95475 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX6O95475 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIX6O95475 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.11■□□□□ 0.01
SIX6O95475 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SIX6O95475 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 AC132872.4-202ENST00000622924 2756 ntBASIC15.1■□□□□ 0.01
SIX6O95475 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 KRT18P11-201ENST00000435214 1283 ntBASIC15.1■□□□□ 0.01
SIX6O95475 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.1■□□□□ 0.01
SIX6O95475 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.1■□□□□ 0.01
SIX6O95475 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 AC011767.1-201ENST00000617410 1153 ntBASIC15.1■□□□□ 0.01
SIX6O95475 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 OR10C1-204ENST00000622521 1039 ntBASIC15.1■□□□□ 0.01
SIX6O95475 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SIX6O95475 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms