Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
BEST1O76090 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST1O76090 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BEST1O76090 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.91■□□□□ 0.62
BEST1O76090 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BEST1O76090 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST1O76090 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST1O76090 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
BEST1O76090 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.9■□□□□ 0.62
BEST1O76090 TSPY19P-201ENST00000418461 509 ntBASIC18.9■□□□□ 0.62
BEST1O76090 TSPY18P-201ENST00000441642 509 ntBASIC18.9■□□□□ 0.62
BEST1O76090 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
BEST1O76090 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 AL138831.2-201ENST00000606564 490 ntBASIC18.9■□□□□ 0.62
BEST1O76090 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
BEST1O76090 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 AC125634.1-201ENST00000438758 1403 ntBASIC18.9■□□□□ 0.62
BEST1O76090 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BEST1O76090 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST1O76090 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BEST1O76090 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BEST1O76090 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BEST1O76090 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BEST1O76090 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST1O76090 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
BEST1O76090 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 AL450487.1-201ENST00000426799 995 ntBASIC18.89■□□□□ 0.61
BEST1O76090 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.89■□□□□ 0.61
BEST1O76090 MINOS1P3-201ENST00000457048 203 ntBASIC18.89■□□□□ 0.61
BEST1O76090 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.89■□□□□ 0.61
BEST1O76090 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.89■□□□□ 0.61
BEST1O76090 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST1O76090 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST1O76090 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST1O76090 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
BEST1O76090 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
BEST1O76090 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.88■□□□□ 0.61
BEST1O76090 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
BEST1O76090 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms