Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
GPC4O75487 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 AC008764.6-201ENST00000595909 2069 ntBASIC18.11■□□□□ 0.49
GPC4O75487 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.11■□□□□ 0.49
GPC4O75487 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GPC4O75487 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC4O75487 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GPC4O75487 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC4O75487 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC4O75487 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC4O75487 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.1■□□□□ 0.49
GPC4O75487 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC4O75487 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.1■□□□□ 0.49
GPC4O75487 GCSHP2-201ENST00000560971 527 ntBASIC18.1■□□□□ 0.49
GPC4O75487 AL023973.1-201ENST00000624619 620 ntBASIC18.1■□□□□ 0.49
GPC4O75487 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GPC4O75487 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 AC135776.1-201ENST00000319817 2481 ntBASIC18.1■□□□□ 0.49
GPC4O75487 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
GPC4O75487 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC4O75487 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC4O75487 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
GPC4O75487 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GPC4O75487 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC4O75487 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GPC4O75487 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.09■□□□□ 0.49
GPC4O75487 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 AC117947.1-201ENST00000427448 529 ntBASIC18.09■□□□□ 0.49
GPC4O75487 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC4O75487 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 AL441883.1-201ENST00000566170 1045 ntBASIC18.09■□□□□ 0.49
GPC4O75487 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
GPC4O75487 AC139887.4-201ENST00000607877 719 ntBASIC18.09■□□□□ 0.49
GPC4O75487 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC4O75487 AC011558.1-201ENST00000623459 338 ntBASIC18.09■□□□□ 0.49
GPC4O75487 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GPC4O75487 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC4O75487 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 AC020916.1-201ENST00000587762 1774 ntBASIC18.09■□□□□ 0.49
GPC4O75487 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GPC4O75487 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC4O75487 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC4O75487 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC4O75487 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
GPC4O75487 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC4O75487 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC4O75487 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.08■□□□□ 0.49
GPC4O75487 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC4O75487 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GPC4O75487 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
GPC4O75487 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
GPC4O75487 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC4O75487 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC4O75487 MIR149-201ENST00000384879 89 ntBASIC18.08■□□□□ 0.48
GPC4O75487 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC4O75487 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC4O75487 YBX1P2-201ENST00000489612 999 ntBASIC18.08■□□□□ 0.48
GPC4O75487 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC4O75487 MIR3917-201ENST00000580971 93 ntBASIC18.08■□□□□ 0.48
GPC4O75487 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.08■□□□□ 0.48
GPC4O75487 AC140113.3-201ENST00000605663 199 ntBASIC18.08■□□□□ 0.48
GPC4O75487 AC006011.2-201ENST00000621313 1158 ntBASIC18.08■□□□□ 0.48
GPC4O75487 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.08■□□□□ 0.48
GPC4O75487 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC4O75487 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC4O75487 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC4O75487 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
GPC4O75487 SDHAP2-201ENST00000455183 2001 ntBASIC18.08■□□□□ 0.48
GPC4O75487 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms