Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF253O75346 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF253O75346 AC138028.4-201ENST00000564984 1845 ntBASIC14.08□□□□□ -0.15
ZNF253O75346 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF253O75346 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF253O75346 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF253O75346 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.08□□□□□ -0.16
ZNF253O75346 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ZNF253O75346 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF253O75346 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 RN7SL471P-201ENST00000580476 299 ntBASIC14.08□□□□□ -0.16
ZNF253O75346 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 AC011298.2-201ENST00000617989 482 ntBASIC14.08□□□□□ -0.16
ZNF253O75346 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 FLJ13224-201ENST00000313737 1514 ntBASIC14.08□□□□□ -0.16
ZNF253O75346 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF253O75346 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF253O75346 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF253O75346 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF253O75346 AL162727.3-201ENST00000635661 2787 ntBASIC14.07□□□□□ -0.16
ZNF253O75346 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
ZNF253O75346 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF253O75346 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 FAM207BP-201ENST00000447172 505 ntBASIC14.07□□□□□ -0.16
ZNF253O75346 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF253O75346 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ZNF253O75346 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.07□□□□□ -0.16
ZNF253O75346 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ZNF253O75346 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ZNF253O75346 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF253O75346 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.07□□□□□ -0.16
ZNF253O75346 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ZNF253O75346 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 AL513477.1-201ENST00000602865 2407 ntBASIC14.06□□□□□ -0.16
ZNF253O75346 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms