Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COPEO14579 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COPEO14579 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.05■□□□□ 0.48
COPEO14579 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.05■□□□□ 0.48
COPEO14579 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.05■□□□□ 0.48
COPEO14579 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.05■□□□□ 0.48
COPEO14579 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.05■□□□□ 0.48
COPEO14579 AC128676.1-201ENST00000454392 318 ntBASIC18.05■□□□□ 0.48
COPEO14579 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.05■□□□□ 0.48
COPEO14579 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.05■□□□□ 0.48
COPEO14579 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.05■□□□□ 0.48
COPEO14579 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 AC092666.2-201ENST00000613287 246 ntBASIC18.05■□□□□ 0.48
COPEO14579 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.05■□□□□ 0.48
COPEO14579 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
COPEO14579 AP001094.4-201ENST00000579008 2176 ntBASIC18.05■□□□□ 0.48
COPEO14579 AC084018.2-201ENST00000613093 2607 ntBASIC18.05■□□□□ 0.48
COPEO14579 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.05■□□□□ 0.48
COPEO14579 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.05■□□□□ 0.48
COPEO14579 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPEO14579 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COPEO14579 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COPEO14579 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.04■□□□□ 0.48
COPEO14579 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.04■□□□□ 0.48
COPEO14579 RPPH1-201ENST00000516869 333 ntBASIC18.04■□□□□ 0.48
COPEO14579 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.04■□□□□ 0.48
COPEO14579 MIR4674-201ENST00000582457 87 ntBASIC18.04■□□□□ 0.48
COPEO14579 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COPEO14579 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 KRT8P7-201ENST00000533003 1432 ntBASIC18.04■□□□□ 0.48
COPEO14579 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COPEO14579 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPEO14579 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
COPEO14579 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COPEO14579 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COPEO14579 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COPEO14579 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COPEO14579 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.03■□□□□ 0.48
COPEO14579 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.03■□□□□ 0.48
COPEO14579 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COPEO14579 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.03■□□□□ 0.48
COPEO14579 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 AC009065.1-201ENST00000564055 1225 ntBASIC18.03■□□□□ 0.48
COPEO14579 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.03■□□□□ 0.48
COPEO14579 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.03■□□□□ 0.48
COPEO14579 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.03■□□□□ 0.48
COPEO14579 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COPEO14579 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
COPEO14579 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPEO14579 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms