Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.56■□□□□ 0.56
DFFAO00273 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.56■□□□□ 0.56
DFFAO00273 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.56■□□□□ 0.56
DFFAO00273 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.56■□□□□ 0.56
DFFAO00273 KRT18P35-201ENST00000510488 1269 ntBASIC18.56■□□□□ 0.56
DFFAO00273 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.56■□□□□ 0.56
DFFAO00273 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.56■□□□□ 0.56
DFFAO00273 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.56■□□□□ 0.56
DFFAO00273 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DFFAO00273 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DFFAO00273 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
DFFAO00273 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DFFAO00273 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DFFAO00273 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.55■□□□□ 0.56
DFFAO00273 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
DFFAO00273 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
DFFAO00273 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.55■□□□□ 0.56
DFFAO00273 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.55■□□□□ 0.56
DFFAO00273 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 IGHGP-201ENST00000390555 1178 ntBASIC18.55■□□□□ 0.56
DFFAO00273 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.55■□□□□ 0.56
DFFAO00273 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.55■□□□□ 0.56
DFFAO00273 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.55■□□□□ 0.56
DFFAO00273 AC113404.2-201ENST00000507884 177 ntBASIC18.55■□□□□ 0.56
DFFAO00273 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.55■□□□□ 0.56
DFFAO00273 RNF126P1-202ENST00000569893 925 ntBASIC18.55■□□□□ 0.56
DFFAO00273 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.55■□□□□ 0.56
DFFAO00273 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.55■□□□□ 0.56
DFFAO00273 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 LINC00167-201ENST00000530583 1419 ntBASIC18.55■□□□□ 0.56
DFFAO00273 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DFFAO00273 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.55■□□□□ 0.56
DFFAO00273 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 NOC2LP1-202ENST00000452600 2235 ntBASIC18.54■□□□□ 0.56
DFFAO00273 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.54■□□□□ 0.56
DFFAO00273 ARMC10P1-201ENST00000313754 855 ntBASIC18.54■□□□□ 0.56
DFFAO00273 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.54■□□□□ 0.56
DFFAO00273 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.54■□□□□ 0.56
DFFAO00273 AC005332.3-201ENST00000589904 676 ntBASIC18.54■□□□□ 0.56
DFFAO00273 GPR32P1-201ENST00000601788 811 ntBASIC18.54■□□□□ 0.56
DFFAO00273 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.54■□□□□ 0.56
DFFAO00273 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.54■□□□□ 0.56
DFFAO00273 AL121956.5-201ENST00000625261 221 ntBASIC18.54■□□□□ 0.56
DFFAO00273 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.54■□□□□ 0.56
DFFAO00273 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DFFAO00273 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
DFFAO00273 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.54■□□□□ 0.56
DFFAO00273 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DFFAO00273 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DFFAO00273 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DFFAO00273 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DFFAO00273 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DFFAO00273 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.53■□□□□ 0.56
DFFAO00273 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DFFAO00273 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.53■□□□□ 0.56
DFFAO00273 Z83836.1-201ENST00000624605 1642 ntBASIC18.53■□□□□ 0.56
DFFAO00273 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.53■□□□□ 0.56
DFFAO00273 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms