Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
AP3B1O00203 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 AC132938.6-201ENST00000623828 1655 ntBASIC18.25■□□□□ 0.51
AP3B1O00203 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3B1O00203 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3B1O00203 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
AP3B1O00203 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.24■□□□□ 0.51
AP3B1O00203 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
AP3B1O00203 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.24■□□□□ 0.51
AP3B1O00203 GCSHP2-201ENST00000560971 527 ntBASIC18.24■□□□□ 0.51
AP3B1O00203 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.24■□□□□ 0.51
AP3B1O00203 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 AC024563.2-201ENST00000603282 481 ntBASIC18.24■□□□□ 0.51
AP3B1O00203 LINC00896-202ENST00000609602 2128 ntBASIC18.24■□□□□ 0.51
AP3B1O00203 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.24■□□□□ 0.51
AP3B1O00203 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
AP3B1O00203 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP3B1O00203 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
AP3B1O00203 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
AP3B1O00203 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.23■□□□□ 0.51
AP3B1O00203 COX11P1-201ENST00000489116 835 ntBASIC18.23■□□□□ 0.51
AP3B1O00203 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.23■□□□□ 0.51
AP3B1O00203 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.23■□□□□ 0.51
AP3B1O00203 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.23■□□□□ 0.51
AP3B1O00203 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.23■□□□□ 0.51
AP3B1O00203 AC066615.1-201ENST00000640911 628 ntBASIC18.23■□□□□ 0.51
AP3B1O00203 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.23■□□□□ 0.51
AP3B1O00203 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
AP3B1O00203 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
AP3B1O00203 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
AP3B1O00203 LINC00167-201ENST00000530583 1419 ntBASIC18.23■□□□□ 0.51
AP3B1O00203 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
AP3B1O00203 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP3B1O00203 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3B1O00203 AC005332.8-201ENST00000622750 2735 ntBASIC18.22■□□□□ 0.51
AP3B1O00203 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.22■□□□□ 0.51
AP3B1O00203 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 PKD1P1-201ENST00000458669 6805 ntBASIC18.22■□□□□ 0.51
AP3B1O00203 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3B1O00203 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms