Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 AC021087.4-201ENST00000563761 564 ntBASIC20.86■□□□□ 0.93
USP17L11C9JVI0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 AC116407.3-201ENST00000623905 1129 ntBASIC20.86■□□□□ 0.93
USP17L11C9JVI0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 KRT18P13-201ENST00000400056 1290 ntBASIC20.85■□□□□ 0.93
USP17L11C9JVI0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.85■□□□□ 0.93
USP17L11C9JVI0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 SART3-203ENST00000546611 1184 ntBASIC20.85■□□□□ 0.93
USP17L11C9JVI0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 ESPNP-201ENST00000270691 2015 ntBASIC20.85■□□□□ 0.93
USP17L11C9JVI0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP17L11C9JVI0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 AL138781.2-201ENST00000617896 1843 ntBASIC20.84■□□□□ 0.93
USP17L11C9JVI0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 AC139530.3-201ENST00000620344 690 ntBASIC20.84■□□□□ 0.93
USP17L11C9JVI0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.84■□□□□ 0.93
USP17L11C9JVI0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 POLD2P1-201ENST00000511220 997 ntBASIC20.83■□□□□ 0.93
USP17L11C9JVI0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP17L11C9JVI0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms