Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 AC093787.1-201ENST00000450396 207 ntBASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 AC004264.1-201ENST00000608354 794 ntBASIC12.85□□□□□ -0.35
LINC01549A6NIU2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
LINC01549A6NIU2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 RCC2P3-201ENST00000418112 1537 ntBASIC12.84□□□□□ -0.35
LINC01549A6NIU2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.84□□□□□ -0.35
LINC01549A6NIU2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01549A6NIU2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01549A6NIU2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 PRKY-204ENST00000533551 1019 ntBASIC12.83□□□□□ -0.36
LINC01549A6NIU2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 AC120498.8-201ENST00000614275 531 ntBASIC12.83□□□□□ -0.36
LINC01549A6NIU2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 AC093010.1-201ENST00000473625 1624 ntBASIC12.83□□□□□ -0.36
LINC01549A6NIU2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms