Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TBC1D3FA6NER0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 AC011467.2-201ENST00000598425 242 ntBASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TBC1D3FA6NER0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AL590627.1-203ENST00000421194 1026 ntBASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 KRT18P67-201ENST00000432816 1264 ntBASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC120114.3-201ENST00000611923 658 ntBASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AL355877.3-201ENST00000622820 899 ntBASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 CROCCP3-202ENST00000420820 1947 ntBASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TBC1D3FA6NER0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 RBM17P3-201ENST00000417687 1192 ntBASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms