Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
TCRBV3S1A0A5B6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TCRBV3S1A0A5B6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AC132938.6-201ENST00000623828 1655 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 KRASP1-201ENST00000407852 552 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 KSR1P1-201ENST00000446298 240 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AL138781.1-201ENST00000566567 1274 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AC026271.3-201ENST00000571884 352 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 DOC2GP-204ENST00000639052 2548 ntBASIC16.89■□□□□ 0.29
TCRBV3S1A0A5B6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 MIR3180-5-201ENST00000583743 153 ntBASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 IKBKGP1-201ENST00000612193 1073 ntBASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV3S1A0A5B6 HOXB1-202ENST00000577092 1414 ntBASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 AL162727.3-201ENST00000635661 2787 ntBASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 LINC01451-201ENST00000623792 534 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms