Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV9-2A0A087WT02 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV9-2A0A087WT02 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AC110285.5-201ENST00000611501 352 ntBASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AC083906.6-201ENST00000641366 219 ntBASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV9-2A0A087WT02 AL135905.2-201ENST00000584934 1404 ntBASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 GCSHP5-201ENST00000443090 522 ntBASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 MTDHP1-201ENST00000605323 784 ntBASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms