Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC4Q9Y696 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 AP000523.1-201ENST00000398242 1049 ntBASIC20.61■□□□□ 0.89
CLIC4Q9Y696 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 AL441883.1-201ENST00000566170 1045 ntBASIC20.61■□□□□ 0.89
CLIC4Q9Y696 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC4Q9Y696 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 AL645608.8-201ENST00000606034 2086 ntBASIC20.6■□□□□ 0.89
CLIC4Q9Y696 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 AC012306.2-201ENST00000609350 630 ntBASIC20.6■□□□□ 0.89
CLIC4Q9Y696 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC4Q9Y696 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 AL355312.1-201ENST00000407115 2176 ntBASIC20.59■□□□□ 0.89
CLIC4Q9Y696 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 AC133561.5-201ENST00000635547 218 ntBASIC20.59■□□□□ 0.89
CLIC4Q9Y696 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC4Q9Y696 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.58■□□□□ 0.89
CLIC4Q9Y696 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 RASA4DP-201ENST00000460726 1199 ntBASIC20.58■□□□□ 0.89
CLIC4Q9Y696 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms