Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 CRYGEP-201ENST00000412192 528 ntBASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AL589182.2-201ENST00000619332 1049 ntBASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 AC092865.6-201ENST00000642101 219 ntBASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTCBQ9Y3I0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RTCBQ9Y3I0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 AC132938.6-201ENST00000623828 1655 ntBASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 C20orf181-201ENST00000623918 480 ntBASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RTCBQ9Y3I0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 AC005082.1-201ENST00000413042 2259 ntBASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 AC004706.3-202ENST00000621574 984 ntBASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCBQ9Y3I0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTCBQ9Y3I0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 HTR5BP-201ENST00000430851 1154 ntBASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms