Protein–RNA interactions for Protein: Q9Y2Q0

ATP8A1, Phospholipid-transporting ATPase IA, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8A1Q9Y2Q0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 PKD1P1-201ENST00000458669 6805 ntBASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 AL645608.8-201ENST00000606034 2086 ntBASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ATP8A1Q9Y2Q0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 MIR564-202ENST00000385049 94 ntBASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 KRT18P57-201ENST00000443599 1254 ntBASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP8A1Q9Y2Q0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 AC073508.3-201ENST00000619697 1419 ntBASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 AC080080.1-201ENST00000625121 2420 ntBASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19■□□□□ 0.63
ATP8A1Q9Y2Q0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 TMPOP1-202ENST00000424642 1267 ntBASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 MIR3180-5-201ENST00000583743 153 ntBASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 FLJ13224-201ENST00000313737 1514 ntBASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP8A1Q9Y2Q0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP8A1Q9Y2Q0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP8A1Q9Y2Q0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP8A1Q9Y2Q0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP8A1Q9Y2Q0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP8A1Q9Y2Q0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms