Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 SEC1P-202ENST00000473944 940 ntBASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 KRT17P6-201ENST00000453795 1220 ntBASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 IFNL4P1-201ENST00000607083 540 ntBASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 AL157888.1-201ENST00000631930 593 ntBASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 AC090164.3-201ENST00000610780 2143 ntBASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC3AQ9Y2H6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
FNDC3AQ9Y2H6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 HLA-F-220ENST00000434407 884 ntBASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 NUS1P1-201ENST00000446295 882 ntBASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 HOXB1-202ENST00000577092 1414 ntBASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
FNDC3AQ9Y2H6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms