Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 AC120114.3-201ENST00000611923 658 ntBASIC17.69■□□□□ 0.42
SATB2Q9UPW6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SATB2Q9UPW6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
SATB2Q9UPW6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AC093503.3-201ENST00000624917 2352 ntBASIC17.67■□□□□ 0.42
SATB2Q9UPW6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 CROCCP3-202ENST00000420820 1947 ntBASIC17.67■□□□□ 0.42
SATB2Q9UPW6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AL592071.1-201ENST00000611956 408 ntBASIC17.67■□□□□ 0.42
SATB2Q9UPW6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AC124864.1-201ENST00000623408 392 ntBASIC17.67■□□□□ 0.42
SATB2Q9UPW6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 PKD1P1-201ENST00000458669 6805 ntBASIC17.67■□□□□ 0.42
SATB2Q9UPW6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SATB2Q9UPW6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 MIR564-202ENST00000385049 94 ntBASIC17.66■□□□□ 0.42
SATB2Q9UPW6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 HLA-A-201ENST00000376802 1334 ntBASIC17.66■□□□□ 0.42
SATB2Q9UPW6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
SATB2Q9UPW6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms