Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC241585.1-201ENST00000433527 519 ntBASIC7.34□□□□□ -1.24
MACF1Q9UPN3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC7.34□□□□□ -1.24
MACF1Q9UPN3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC7.34□□□□□ -1.24
MACF1Q9UPN3 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC7.34□□□□□ -1.24
MACF1Q9UPN3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC006333.2-201ENST00000607957 2099 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 C2orf69P2-201ENST00000562032 1123 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AL353593.2-201ENST00000602529 1483 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 RNA5SP412-201ENST00000516234 123 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 MIR6080-201ENST00000617359 66 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 WWC2-AS2-201ENST00000578387 2183 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 RCC2P3-201ENST00000418112 1537 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC022144.1-201ENST00000602255 1580 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC7.33□□□□□ -1.24
MACF1Q9UPN3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC7.33□□□□□ -1.24
MACF1Q9UPN3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 NUS1P3-201ENST00000423502 862 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 GNAQP1-201ENST00000444815 1067 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 FP700111.2-201ENST00000619190 1892 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 AP001889.1-201ENST00000525414 633 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 RNA5-8SN1-201ENST00000610460 153 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 RNA5-8SN5-202ENST00000612463 153 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 RNA5-8SN4-201ENST00000613359 153 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 RNA5-8SN5-201ENST00000619471 153 ntBASIC7.32□□□□□ -1.24
MACF1Q9UPN3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MACF1Q9UPN3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms