Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 LINC00265-3P-201ENST00000447588 903 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 TOB2P1-201ENST00000469761 992 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 UNC93B7-201ENST00000509439 705 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 AP000867.3-201ENST00000524675 377 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 AC083906.6-201ENST00000641366 219 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 AL163051.1-201ENST00000569214 1512 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 TNRC18P3-201ENST00000441896 2691 ntBASIC20.76■□□□□ 0.91
DDX41Q9UJV9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DDX41Q9UJV9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 AP000593.1-201ENST00000393668 712 ntBASIC20.75■□□□□ 0.91
DDX41Q9UJV9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 RN7SL510P-201ENST00000581311 263 ntBASIC20.75■□□□□ 0.91
DDX41Q9UJV9 IGHV3-41-201ENST00000613121 348 ntBASIC20.75■□□□□ 0.91
DDX41Q9UJV9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX41Q9UJV9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 KRT89P-201ENST00000620027 1478 ntBASIC20.74■□□□□ 0.91
DDX41Q9UJV9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
DDX41Q9UJV9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms