Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 POU5F1P3-201ENST00000428824 1078 ntBASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 AC099343.3-201ENST00000605834 2503 ntBASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD3Q9UBI1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 AC006015.1-201ENST00000429970 570 ntBASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 KRT18P41-201ENST00000518924 1277 ntBASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 AC133552.2-202ENST00000575694 574 ntBASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 KRT8P11-201ENST00000409686 1436 ntBASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COMMD3Q9UBI1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
COMMD3Q9UBI1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 AC008741.2-201ENST00000612792 3115 ntBASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 AC092368.3-202ENST00000574180 1591 ntBASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.89■□□□□ 0.13
COMMD3Q9UBI1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms